Characterization of persistent organic contaminants in the atmosphere of Gadani's ship breaking yards and its surrounding: Implications for sustainable ship recycling practices.

Gadani is internationally renowned for its extensive ship-breaking operations, positioning it as one of the globe's primary ship-breaking hubs. A comprehensive study was conducted to evaluate the presence of organic contaminants in the air within Gadani, encompassing the areas surrounding ship-breaking facilities, proximate residential settlements, and adjacent roadways. Passive air samplers were employed to collect a total of 30 air samples. The analytical results unveiled a notably elevated concentration of specific organic compounds, with a pronounced prevalence of polycyclic aromatic hydrocarbons (PAHs), short-chain chlorinated paraffins (SCCPs), and polychlorinated biphenyls (PCBs) at the ship-breaking yard. Notably, dichlorodiphenyltrichloroethanes (DDTs) and DDE were detected at substantially lower levels. In particular, sites in close proximity to ship-breaking activities exhibited elevated concentrations of PCBs (Σ7PCB 0.065429 to 7.345714 ng/sample), PAHs (Σ8PAH 2.44 to 134.23 ng/sample), and SCCPs (0.18 to 25.6 ng/sample). Conversely, DDTs and DDE demonstrated higher concentrations near residential settlements. The evaluation of Molecular Diagnostic Ratios for PAHs revealed anthracene/anthracene + phenanthrene ratios of 0.88, 0.69, and 0.5 for ship-breaking areas, roadside locations, and community surroundings, respectively. Furthermore, the benz[a]anthracene/benz-[a]anthracene + chrysene molecular ratios were measured at 0.77 (ship-breaking sites), 0.82 (roadside), and 0.83 (community), respectively. The molecular ratio of fluoranthene/fluoranthene + pyrene at ship-breaking sites was 0.23, while roadside and community ratios were 0.36 and 0.89, respectively. These findings underscore the significant contribution of ship-recycling activities to the atmospheric release of SCCPs, PCBs, and PAHs, emphasizing the global imperative for responsible ship recycling practices.

A putative cytotoxic serine protease from Salmonella typhimurium UcB5 recovered from undercooked burger.

A putative virulence exoprotease designated as UcB5 was successfully purified from the bacterium Salmonella typhimurium to the electrophoretic homogeneity with 13.2-fold and 17.1% recovery by hydrophobic, ion-exchange, and gel permeation chromatography using Phenyl-Sepharose 6FF, DEAE-Sepharose CL-6B, and Sephadex G-75, respectively. By applying SDS-PAGE, the molecular weight was confirmed at 35 kDa. The optimal temperature, pH, and isoelectric point were 35 °C, 8.0, 5.6 ± 0.2, respectively. UcB5 was found to have a broad substrate specificity against almost all the tested chromogenic substrates with maximal affinity against N-Succ-Ala-Ala-Pro-Phe-pNA achieving Km of 0.16 mM, Kcat/Km of 3.01 × 105 S-1 M-1, and amidolytic activity of 28.9 µmol min-1 L-1. It was drastically inhibited by TLCK, PMSF, SBTI, and aprotinin while, DTT, ß-mercaptoethanol, 2,2'-bipyridine, o-phenanthroline, EDTA, and EGTA had no effect, which suggested a serine protease-type. Also, it has shown a broad substrate specificity against a broad range of natural proteins including serum proteins. A cytotoxicity and electron microscopy study revealed that UcB5 could cause subcellular proteolysis that finally led to liver necrosis. For this, future research should focus on using a combination of external antiproteases and antimicrobial agents for the treatment of microbial diseases instead of using drugs alone.

Biomonitoring coastal pollution on the Arabian Gulf and the Gulf of Aden using macroalgae: A review.

The transporting of oil via the Arabian Gulf for centuries has resulted in the pollution of the coasts by heavy metals, and therefore, remediation actions are needed. In this review, we first evaluated heavy metal pollution on the coasts by assembling the research on published metal concentrations in sediments and water bodies surrounding the Arabian Peninsula. Research revealed uneven pollution of heavy metals, meaning that before remediation, the most polluted sites should be found. This could be done most conveniently using biomonitoring. The Arabian Peninsula is a unique ecoregion due to the extremely high temperature in summer, and therefore, it needs its specific standardization procedure for biomonitoring. To get an overview of the current information on biomonitoring, we gathered a dataset of 306 published macroalgal observations from the Arabian Gulf and the Gulf of Aden. The heavy metal concentration dataset of macroalgae was analyzed with a multivariate principal component analysis. As a result of the published works elsewhere and our data analysis, we recommend that green Ulva and brown Padina species are used in the biomonitoring of heavy metal pollution on the Arabian Peninsula's eastern and southern coasts. However, more species might be needed if these species do not occur at the site. The species incidence should first be monitored systematically in each area, and common species should be used. The species used should be chosen locally and sampled at the same depth at low tide in spring or early summer, from February to May, before the hottest season. The composite samples of different apical sections of the thallus should be collected. The standardization of the monitoring processes benefits future remediation actions.

Assessment of coastal salt marsh plants on the Arabian Gulf region.

Salt marshes form along coastlines and are very interesting ecosystems due to their function and services. In the future, salt marsh plants might provide food and medicine as crops irrigated via seawater in hyper-arid regions. In the Arabian Gulf, little is known about salt marsh vegetation. Therefore, a targeted search on scientific literature was performed to provide a comprehensive assessment. Hence, current knowledge of the extent and status of salt marsh in the Arabian Gulf region was reviewed, based on literature-based analysis. Then, historic trends of salt marsh publications were carefully inspected. This study provides a list of salt marsh families and their genera and species, with a total of 51 family 179 genera 316 species in the Arabian Gulf. The largest family was Chenopodiaceae followed by Poaceae, Asteraceae. Moreover, this study identified some of the gaps that could help future directions for scientific research, and help making decisions of conservation, management policies and procedures.

You Are What You Eat: Application of Metabolomics Approaches to Advance Nutrition Research.

A healthy condition is defined by complex human metabolic pathways that only function properly when fully satisfied by nutritional inputs. Poor nutritional intakes are associated with a number of metabolic diseases, such as diabetes, obesity, atherosclerosis, hypertension, and osteoporosis. In recent years, nutrition science has undergone an extraordinary transformation driven by the development of innovative software and analytical platforms. However, the complexity and variety of the chemical components present in different food types, and the diversity of interactions in the biochemical networks and biological systems, makes nutrition research a complicated field. Metabolomics science is an "-omic", joining proteomics, transcriptomics, and genomics in affording a global understanding of biological systems. In this review, we present the main metabolomics approaches, and highlight the applications and the potential for metabolomics approaches in advancing nutritional food research.

Nutrition in Herbal Plants Used in Saudi Arabia.

Herbs are used for centuries by many people worldwide. This study derives insights into the use and content of herbs that are consumed among Saudi citizens. An online questionnaire was distributed to understand the basic information about Saudi citizens' preference and daily patterns of herbal plants that are usually used as drinks. Moreover, concentrations of fourteen elements in twenty-one herbal plants that were indicated in the previous questionnaire were collected from the local market and then analyzed using an Inductively Coupled Plasma Emission Spectrometry (ICP). Mint leaves were significantly higher in most of the nutrients analyzed, and mint was the most popular drink among participants, followed by green tea and anise. Most of the citizens preferred to drink one cup only at home and believed that herbs are good for their health and potentially could help them to sleep better. The outcomes derived from this research could help future assessments of diet patterns among Saudi citizens.

Amelioration of heavy metal stress by endophytic Bacillus amyloliquefaciens RWL-1 in rice by regulating metabolic changes: potential for bacterial bioremediation.

This study aimed to investigate the bioremediation efficiency of phytohormone-producing endophytic Bacillus amyloliquefaciens RWL-1 isolated from rice seeds. In this study, we tested RWL-1 against various heavy metals (Cu, Cr, Pb, and Cd). Among the tested heavy metals, RWL-1 showed the highest tolerance for Cu stress and we observed alterations in growth kinetics with various Cu concentrations (1, 2.5, and 5 mM). We confirmed the biosorption potential of RWL-1 by scanning electron microscopy coupled with energy-dispersive X-ray spectrometry showing that Cu ions were adsorbed on RWL-1 cell surfaces. We further tested RWL-1 for its plant growth promoting and stress reliance efficiency in response to a dose-dependent increase in soil Cu (1, 2.5, and 5 mM). The RWL-1 inoculation significantly increased seedling biomass and growth attributes compared with non-inoculated control seedlings with and without Cu stress. Moreover, RWL-1 inoculation significantly promoted a physiochemical response in seedlings with and without Cu stress by reducing Cu uptake, improving carbohydrate levels (glucose, sucrose, fructose, and raffinose), enhancing amino acids regulation, and augmenting antioxidant levels (POD, PPO, and GHS). Levels of stress-responsive phytohormones such as abscisic acid (ABA) and jasmonic acid were significantly reduced in RWL-1-inoculated seedlings as compared with non-inoculated control seedlings under normal condition and same levels of Cu stress. In conclusion, the inoculation of B. amyloliquefaciens RWL-1 can significantly improve plant growth in Cu-contaminated soil and reduce metal accumulation, thus making plants safer for consumption. This approach could be tremendously helpful for safe and sustainable agriculture in heavy metal-contaminated areas.

Mangrove forests as traps for marine litter.

To verify weather mangroves act as sinks for marine litter, we surveyed through visual census 20 forests along the Red Sea and the Arabian Gulf, both in inhabited and remote locations. Anthropogenic debris items were counted and classified along transects, and the influence of main drivers of distribution were considered (i.e. land-based and ocean-based sources, density of the forest and properties of the object). We confirmed that distance to major maritime traffic routes significantly affects the density of anthropogenic debris in Red Sea mangrove forests, while this was independent of land-based activities. This suggests ocean-based activities combined with surface currents as major drivers of litter in this basin. Additionally, litter was more abundant where the mangrove density was higher, and object distribution through the mangrove stand often depended on their shape and dimension. We particularly show that pneumatophores act as a sieve retaining large plastic objects, leading to higher plastic mass estimates in mangroves compared to those of beaches previously surveyed in the Red Sea.

High levels of heavy metals in Western Arabian Gulf mangrove soils.

Major development along the Western Arabian Gulf coast has disturbed the marine environment, and led to increased concentrations of heavy metals in the coastal soils. The amount of 13 of these metals (Ag, Al, As, Cd, Cr, Cu, Fe, Mn, Mo, Ni, Pb, V and Zn) in Avicennia marina branches and leaves as well as in rhizosphere soil samples from two Bays 70 km apart (Tarut Bay; Saudi Arabia and Tubli Bay; Bahrain) was quantified. Heavy metal concentration in the two bays were similar and higher than those reported in other regions suggesting a generalized heavy metal pollution in the area. These concentrations are much higher than the international permissible limits of soil contaminations except for Iron and Manganese which were within the limits. The results indicate that marine environments in the area need recovery plans and monitoring.

Carbon stocks and accumulation rates in Red Sea seagrass meadows.

Seagrasses play an important role in climate change mitigation and adaptation, acting as natural CO2 sinks and buffering the impacts of rising sea level. However, global estimates of organic carbon (Corg) stocks, accumulation rates and seafloor elevation rates in seagrasses are limited to a few regions, thus potentially biasing global estimates. Here we assessed the extent of soil Corg stocks and accumulation rates in seagrass meadows (Thalassia hemprichii, Enhalus acoroides, Halophila stipulacea, Thalassodendrum ciliatum and Halodule uninervis) from Saudi Arabia. We estimated that seagrasses store 3.4 ± 0.3 kg Corg m-2 in 1 m-thick soil deposits, accumulated at 6.8 ± 1.7 g Corg m-2 yr-1 over the last 500 to 2,000 years. The extreme conditions in the Red Sea, such as nutrient limitation reducing seagrass growth rates and high temperature increasing soil respiration rates, may explain their relative low Corg storage compared to temperate meadows. Differences in soil Corg storage among habitats (i.e. location and species composition) are mainly related to the contribution of seagrass detritus to the soil Corg pool, fluxes of Corg from adjacent mangrove and tidal marsh ecosystems into seagrass meadows, and the amount of fine sediment particles. Seagrasses sequester annually around 0.8% of CO2 emissions from fossil-fuels by Saudi Arabia, while buffering the impacts of sea level rise. This study contributes data from understudied regions to a growing dataset on seagrass carbon stocks and sequestration rates and further evidences that even small seagrass species store Corg in coastal areas.

Spatial coverage of mangrove communities in the Arabian Gulf.

Mangroves are the natural protectors of the coast, carbon sinks, and a nursery to many terrestrial as well as aquatic organisms. Different effects caused by natural forces together with anthropogenic factors have reduced mangrove cover on a global scale, yet little is known about the overall surface covered by mangroves in the Arabian Gulf. Therefore, the aim of this study was to examine their spatial coverage and distribution along the Gulf coastlines, using 25 satellite imagery recently acquired from Landsat 8 data for the year 2017. This study found about 165 km2 of fragmented scattered mangroves, mostly intense in the United Arab Emirates, where plantation projects have likely played a significant role in increasing their cover over the years. Whereas mangrove in Kuwait is rare, areas like Bahrain, Qatar and Saudi Arabia remained stable with a slight increase. However, mangroves in Iran appear to suffer a decline throughout the years.

Low Carbon sink capacity of Red Sea mangroves.

Mangroves forests of Avicennia marina occupy about 135 km2 in the Red Sea and represent one of the most important vegetated communities in this otherwise arid and oligotrophic region. We assessed the soil organic carbon (Corg) stocks, soil accretion rates (SAR; mm y-1) and soil Corg sequestration rates (g Corg m-2 yr-1) in 10 mangrove sites within four locations along the Saudi coast of the Central Red Sea. Soil Corg density and stock in Red Sea mangroves were among the lowest reported globally, with an average of 4 ± 0.3 mg Corg cm-3 and 43 ± 5 Mg Corg ha-1 (in 1 m-thick soils), respectively. Sequestration rates of Corg, estimated at 3 ± 1 and 15 ± 1 g Corg m-2 yr-1 for the long (millennia) and short (last century) temporal scales, respectively, were also relatively low compared to mangrove habitats from more humid bioregions. In contrast, the accretion rates of Central Red Sea mangroves soils were within the range reported for global mangrove forests. The relatively low Corg sink capacity of Red Sea mangroves could be due to the extreme environmental conditions such as low rainfall, nutrient limitation and high temperature, reducing the growth rates of the mangroves and increasing soil respiration rates.

Phenology and Growth dynamics of Avicennia marina in the Central Red Sea.

The formation of nodes, stem elongation and the phenology of stunted Avicennia marina was examined in the Central Red Sea, where Avicennia marina is at the limit of its distribution range and submitted to extremely arid conditions with salinity above 38 psu and water temperature as high as 35° C. The annual node production was rather uniform among locations averaging 9.59 node y-1, which resulted in a plastocron interval, the interval in between production of two consecutive nodes along a stem, of 38 days. However, the internodal length varied significantly between locations, resulting in growth differences possibly reflecting the environmental conditions of locations. The reproductive cycle lasted for approximately 12 months, and was characterized by peak flowering and propagule development in November and January. These phenological observations provide a starting point for research and restoration programs on the ecology of mangroves in the Central Red Sea, while the plastochrone index reported here would allow calculations of the growth and production of the species from simple morphological measurements.